This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000QCVG.1

USA/IL060815CoPNa/2006-08-15
G. Amore, L. Bertolotti, G. L. Hamer, U. D. Kitron, E. D. Walker, M. O. Ruiz, J. D. Brawn & T. L. Goldberg

Facolta' di Medicina Veterinaria, Produzioni Animali, Epidemiologia ed Ecologia

Sample details

Collection date
2006-08-15
Earliest release date
2010-04-07
Sampling location
USA (Illinois, Cook County)
Isolate name
IL060815CoPNa

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-03-26 21:57insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2010-04-07
NCBI update date
2016-07-25
INSDC accession

Host

Host

Submission details

Submission ID
GU386813.1
Submitting group
Date submitted
2026-03-26 21:56:43 UTC
Date released
2026-03-26 22:00:26 UTC

Lineage

Lineage
1A

Files

Annotations

Alignment and QC

Total SNPs
8
Length
1575 (14.3%)
Amino Acid Mutations from founder clade
  • env:K93R
  • env:T126I
  • env:I159A
Variant
True

Nucleotide mutations

Mutations called relative to the NC_009942.1 reference

Substitutions

  • T1442C
  • C1465T
  • G1662A
  • C1750T
  • T1855C
  • T2046C
  • T2289G
  • C2466T
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_009942.1 reference

Substitutions

env

  • env:V159A
  • env:L167F
Deletions
N/A
Insertions
N/A

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