This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_001EE3K.1

Israel/ISR-1505/2018-10-01
Y. Farnoushi, S. Mechani, A. Lublin, O. Erster & G. Schvartz

Kimron Veterinay Institue, Division of Avian Diseases

Sample details

Collection date
2018-10
Earliest release date
2019-07-23
Sampling location
Israel
Isolate name
ISR-1505

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-03-26 21:57insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2019-07-23
NCBI update date
2019-07-23
INSDC accession

Host

Host

Submission details

Submission ID
MK343719.1
Submitting group
Date submitted
2026-03-26 21:57:25 UTC
Date released
2026-03-26 22:11:59 UTC

Lineage

Lineage
1A

Files

Annotations

Alignment and QC

Total SNPs
26
Length
865 (7.84%)
Amino Acid Mutations from founder clade
  • capsid:K108N
  • capsid:V113A
Variant
True

Nucleotide mutations

Mutations called relative to the NC_009942.1 reference

Substitutions

  • T195A
  • C210T
  • T234C
  • G354A
  • G420T
  • C423T
  • T434C
  • G495T
  • G588A
  • C600T
  • T606C
  • T615A
  • A630G
  • T639C
  • C783T
  • G786A
  • G792T
  • T826C
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_009942.1 reference

Substitutions

capsid

  • capsid:K108N
  • capsid:V113A
Deletions
N/A
Insertions
N/A

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